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13 lines
535 B
Plaintext
13 lines
535 B
Plaintext
Infernal, standing for "INFERence of RNA ALignment", is a tool for searching
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DNA sequence database for RNA structure and sequence similarities.
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It is based on Covariance Model (CM), which scores a combination of sequence
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consensus and RNA secondary structure consensus, and thus is more capable of
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identifying RNA homologs than using primary sequence profile.
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The Rfam database of RNA families is based on Infernal.
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Citation:
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Nawrocki & Eddy (2013) Infernal 1.1: 100-fold faster RNA homology searches,
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Bioinformatics 29: 2933-2935.
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